So I'm one of those with the following in the Notes.css file in TheBrain 8:

P {
margin-top: 0pt;
margin-bottom: 10pt;

As a result, prior to 9.0.84 my notes looked fine in TheBrain 9 after importing them. After the 9.0.84 notes import change all the paragraphs are now new lines.

Given the complaints about the previous import format I'm guessing I'm not the norm, so I don't know that it's worth fixing for just a few (or 1) people, but reporting it anyway.

macOS 10.14.6
TheBrain 11.0.119
Thanks for reporting zenrain. We'll take a closer look at this.

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